A genome-wide association study of bronchodilator response in Latinos implicates rare variants

BackgroundThe primary rescue medication to treat acute asthma exacerbation is the short-acting β₂-adrenergic receptor agonist; however, there is variation in how well a patient responds to treatment. Although these differences might be due to environmental factors, there is mounting evidence for a genetic contribution to variability in bronchodilator response (BDR).ObjectiveTo identify genetic variation associated with bronchodilator drug response in Latino children with asthma.MethodsWe performed a genome-wide association study (GWAS) for BDR in 1782 Latino children with asthma using standard... Mehr ...

Verfasser: Drake, Katherine A
Torgerson, Dara G
Gignoux, Christopher R
Galanter, Joshua M
Roth, Lindsey A
Huntsman, Scott
Eng, Celeste
Oh, Sam S
Yee, Sook Wah
Lin, Lawrence
Bustamante, Carlos D
Moreno-Estrada, Andrés
Sandoval, Karla
Davis, Adam
Borrell, Luisa N
Farber, Harold J
Kumar, Rajesh
Avila, Pedro C
Brigino-Buenaventura, Emerita
Chapela, Rocio
Ford, Jean G
LeNoir, Michael A
Lurmann, Fred
Meade, Kelley
Serebrisky, Denise
Thyne, Shannon
Rodríguez-Cintrón, William
Sen, Saunak
Rodríguez-Santana, José R
Hernandez, Ryan D
Giacomini, Kathleen M
Burchard, Esteban G
Dokumenttyp: Artikel
Erscheinungsdatum: 2014
Reihe/Periodikum: Journal of Allergy and Clinical Immunology, vol 133, iss 2
Verlag/Hrsg.: eScholarship
University of California
Schlagwörter: Pharmacology and Pharmaceutical Sciences / Biomedical and Clinical Sciences / Clinical Research / Patient Safety / Asthma / Genetics / Lung / Human Genome / Aetiology / 2.1 Biological and endogenous factors / Respiratory / Adolescent / Adult / Albuterol / Bronchodilator Agents / Child / Forced Expiratory Volume / Genome-Wide Association Study / Genotype / Hispanic or Latino / Humans / Polymorphism / Single Nucleotide / Young Adult / Bronchodilator response / admixture mapping / Latinos / rare variants / BDR / GALA I / GALA II / GWAS / Genes-Environments & Admixture in Latino Americans / Genetics of Asthma in Latino Americans / IGF / Insulin-like growth factor / LD / Linkage disequilibrium / MAF / Minor allele frequency / QC / Quality control / SABA / SLC / SNP / Short-acting β(2)-adrenergic receptor agonist / Single nucleotide polymorphism
Sprache: unknown
Permalink: https://search.fid-benelux.de/Record/base-29263951
Datenquelle: BASE; Originalkatalog
Powered By: BASE
Link(s) : https://escholarship.org/uc/item/0573g4jn

BackgroundThe primary rescue medication to treat acute asthma exacerbation is the short-acting β₂-adrenergic receptor agonist; however, there is variation in how well a patient responds to treatment. Although these differences might be due to environmental factors, there is mounting evidence for a genetic contribution to variability in bronchodilator response (BDR).ObjectiveTo identify genetic variation associated with bronchodilator drug response in Latino children with asthma.MethodsWe performed a genome-wide association study (GWAS) for BDR in 1782 Latino children with asthma using standard linear regression, adjusting for genetic ancestry and ethnicity, and performed replication studies in an additional 531 Latinos. We also performed admixture mapping across the genome by testing for an association between local European, African, and Native American ancestry and BDR, adjusting for genomic ancestry and ethnicity.ResultsWe identified 7 genetic variants associated with BDR at a genome-wide significant threshold (P < 5 × 10(-8)), all of which had frequencies of less than 5%. Furthermore, we observed an excess of small P values driven by rare variants (frequency, <5%) and by variants in the proximity of solute carrier (SLC) genes. Admixture mapping identified 5 significant peaks; fine mapping within these peaks identified 2 rare variants in SLC22A15 as being associated with increased BDR in Mexicans. Quantitative PCR and immunohistochemistry identified SLC22A15 as being expressed in the lung and bronchial epithelial cells.ConclusionOur results suggest that rare variation contributes to individual differences in response to albuterol in Latinos, notably in SLC genes that include membrane transport proteins involved in the transport of endogenous metabolites and xenobiotics. Resequencing in larger, multiethnic population samples and additional functional studies are required to further understand the role of rare variation in BDR.