High number of HPAI H5 virus infections and antibodies in wild carnivores in the Netherlands, 2020–2022

In October 2020, a new lineage of a clade 2.3.4.4b HPAI virus of the H5 subtype emerged in Europe, resulting in the largest global outbreak of HPAI to date, with unprecedented mortality in wild birds and poultry. The virus appears to have become enzootic in birds, continuously yielding novel HPAI virus variants. The recently increased abundance of infected birds worldwide increases the probability of bird–mammal contact, particularly in wild carnivores. Here, we performed molecular and serological screening of over 500 dead wild carnivores and sequencing of RNA positive materials. We show viro... Mehr ...

Verfasser: Irina V. Chestakova
Anne van der Linden
Beatriz Bellido Martin
Valentina Caliendo
Oanh Vuong
Sanne Thewessen
Tijmen Hartung
Theo Bestebroer
Jasja Dekker
Bob Jonge Poerink
Andrea Gröne
Marion Koopmans
Ron Fouchier
Judith M. A. van den Brand
Reina S. Sikkema
Dokumenttyp: Dataset
Erscheinungsdatum: 2023
Schlagwörter: Medicine / Neuroscience / Biotechnology / Evolutionary Biology / Ecology / Mental Health / Infectious Diseases / Virology / Computational Biology / Avian influenza / wildlife / carnivores / antibodies / Europe / phylogeny / zoonoses
Sprache: unknown
Permalink: https://search.fid-benelux.de/Record/base-29197922
Datenquelle: BASE; Originalkatalog
Powered By: BASE
Link(s) : https://doi.org/10.6084/m9.figshare.24314841.v2

In October 2020, a new lineage of a clade 2.3.4.4b HPAI virus of the H5 subtype emerged in Europe, resulting in the largest global outbreak of HPAI to date, with unprecedented mortality in wild birds and poultry. The virus appears to have become enzootic in birds, continuously yielding novel HPAI virus variants. The recently increased abundance of infected birds worldwide increases the probability of bird–mammal contact, particularly in wild carnivores. Here, we performed molecular and serological screening of over 500 dead wild carnivores and sequencing of RNA positive materials. We show virological evidence for HPAI H5 virus infection in 0.8%, 1.4%, and 9.9% of animals tested in 2020, 2021, and 2022 respectively, with the highest proportion of positives in foxes, polecats and stone martens. We obtained near full genomes of 7 viruses and detected PB2 amino acid substitutions known to play a role in mammalian adaptation in three sequences. Infections were also found in without neurological signs or mortality. Serological evidence for infection was detected in 20% of the study population. These findings suggests that a high proportion of wild carnivores is infected but undetected in current surveillance programmes. We recommend increased surveillance in susceptible mammals, irrespective of neurological signs or encephalitis.