Zwartia hollandica gen. nov., sp. nov., Jezberella montanilacus gen. nov., sp. nov. and Sheuella amnicola gen. nov., comb. nov., representing the environmental GKS98 (betIII) cluster

We present two strains affiliated with the GKS98 cluster. This phylogenetically defined cluster is representing abundant, mainly uncultured freshwater bacteria, which were observed by many cultivation-independent studies on the diversity of bacteria in various freshwater lakes and streams. Bacteria affiliated with the GKS98 cluster were detected by cultivation-independent methods in freshwater systems located in Europe, Asia, Africa and the Americas. The two strains, LF4-65 T (=CCUG 56422 T =DSM 107630 T ) and MWH-P2sevCIIIb T (=CCUG 56420 T =DSM 107629 T ), are aerobic chemoorganotrophs, both... Mehr ...

Verfasser: Hahn, Martin W.
Pitt, Alexandra
Schmidt, Johanna
Koll, Ulrike
Wolf, Jacqueline
Whitman, William B.
Bodelier, Paul L.E.
Neumann-Schaal, Meina
Dokumenttyp: Artikel
Erscheinungsdatum: 2022
Reihe/Periodikum: Hahn , M W , Pitt , A , Schmidt , J , Koll , U , Wolf , J , Whitman , W B , Bodelier , P L E & Neumann-Schaal , M 2022 , ' Zwartia hollandica gen. nov., sp. nov., Jezberella montanilacus gen. nov., sp. nov. and Sheuella amnicola gen. nov., comb. nov., representing the environmental GKS98 (betIII) cluster ' , International Journal of Systematic and Evolutionary Microbiology , vol. 72 , no. 9 , 005513 . https://doi.org/10.1099/ijsem.0.005513
Schlagwörter: bacterioplankton / freshwater / genome size / GKS98 / Orrella
Sprache: Englisch
Permalink: https://search.fid-benelux.de/Record/base-29075803
Datenquelle: BASE; Originalkatalog
Powered By: BASE
Link(s) : https://pure.knaw.nl/portal/en/publications/7bc1c86f-b6c0-4e56-a317-553dada42cef

We present two strains affiliated with the GKS98 cluster. This phylogenetically defined cluster is representing abundant, mainly uncultured freshwater bacteria, which were observed by many cultivation-independent studies on the diversity of bacteria in various freshwater lakes and streams. Bacteria affiliated with the GKS98 cluster were detected by cultivation-independent methods in freshwater systems located in Europe, Asia, Africa and the Americas. The two strains, LF4-65 T (=CCUG 56422 T =DSM 107630 T ) and MWH-P2sevCIIIb T (=CCUG 56420 T =DSM 107629 T ), are aerobic chemoorganotrophs, both with genome sizes of 3.2 Mbp and G+C values of 52.4 and 51.0 mol%, respectively. Phylogenomic analyses based on concatenated amino acid sequences of 120 proteins suggest an affiliation of the two strains with the family Alcaligenaceae and revealed Orrella amnicola and Orrella marina (= Algicoccus marinus) as being the closest related, previously described species. However, the calculated phylogenomic trees clearly suggest that the current genus Orrella represents a polyphyletic taxon. Based on the branching order in the phylogenomic trees, as well as the revealed phylogenetic distances and chemotaxonomic traits, we propose to establish the new genus Zwartia gen. nov. and the new species Z. hollandica sp. nov. to harbour strain LF4-65 T and the new genus Jezberella gen. nov. and the new species J. montanila-cus sp. nov. to harbour strain MWH-P2sevCIIIb T . Furthermore, we propose the reclassification of the species Orrella amnicola in the new genus Sheuella gen. nov. The new genera Zwartia, Jezberella and Sheuella together represent taxonomically the GKS98 cluster.