Proposal steps for updates between sub-trees.

In purple is the focal host, with the purple arrow indicating the proposed infection time . The red arrows indicate the transmission events and the history host is colored red, with the introductions as transmission from the history host. 2: Losing an introduction by proposing a new infector M i ≠ 0 for an index case. 3a: The reverse of 2, by proposing a new infector M i = 0 for a non-index case. 3b: Switching sub-trees by proposing a new infector M i ≠ 0 on a different sub-tree. Situation 3b is also possible within the same sub-tree.

Verfasser: Bastiaan R. Van der Roest
Martin C. J. Bootsma
Egil A. J. Fischer
Don Klinkenberg
Mirjam E. E. Kretzschmar
Dokumenttyp: Image
Erscheinungsdatum: 2023
Schlagwörter: Medicine / Biotechnology / Evolutionary Biology / Ecology / Cancer / Infectious Diseases / Computational Biology / Biological Sciences not elsewhere classified / Mathematical Sciences not elsewhere classified / Information Systems not elsewhere classified / determine risk factors / aid infection control / multiple phylogenetic clusters / method correctly identifies / bayesian inference method / infectious disease outbreaks / div >< p / dutch mink farms / introduced multiple times / estimate transmission trees / genome sequencing data / infectious disease / genome sequencing / mink farms / transmission trees / multiple introductions / 63 farms / 13 farms / transmission routes / transmission events / single introduction / priori split / phybreak </ / observed cases / new feature / host dynamics / existing models / epidemiological data / complex class / always true / additional feature / accuracy depending
Sprache: unknown
Permalink: https://search.fid-benelux.de/Record/base-29034415
Datenquelle: BASE; Originalkatalog
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Link(s) : https://doi.org/10.1371/journal.pcbi.1010928.g004