Maximum parent credibility transmission tree with with-host phylogenetic trees for SARS-CoV-2 outbreak in mink farms.

The farms are colored according to the clusters found by Lu et al. (2021): cluster A: red; cluster B; yellow, cluster C: green; cluster D: blue, cluster E: purple, cluster unknown: black. Cluster A is divided into 5 smaller clusters, with cluster A1 introduced in NB-EMC-1 and cluster A2 introduced in NB-EMC-46. (TIF)

Volltext
Verfasser: Bastiaan R. Van der Roest
Martin C. J. Bootsma
Egil A. J. Fischer
Don Klinkenberg
Mirjam E. E. Kretzschmar
Dokumenttyp: Image
Erscheinungsdatum: 2023
Schlagwörter: Medicine / Biotechnology / Evolutionary Biology / Ecology / Cancer / Infectious Diseases / Computational Biology / Biological Sciences not elsewhere classified / Mathematical Sciences not elsewhere classified / Information Systems not elsewhere classified / determine risk factors / aid infection control / multiple phylogenetic clusters / method correctly identifies / bayesian inference method / infectious disease outbreaks / div >< p / dutch mink farms / introduced multiple times / estimate transmission trees / genome sequencing data / infectious disease / genome sequencing / mink farms / transmission trees / multiple introductions / 63 farms / 13 farms / transmission routes / transmission events / single introduction / priori split / phybreak </ / observed cases / new feature / host dynamics / existing models / epidemiological data / complex class / always true / additional feature / accuracy depending
Sprache: unknown
Permalink: https://search.fid-benelux.de/Record/base-29034407
Datenquelle: BASE; Originalkatalog
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Link(s) : https://doi.org/10.1371/journal.pcbi.1010928.s009