Comparison of the Norwegian, Dutch, and Japanese vanD -GIs built using Easyfig.
A1-3 GIs have similar gene organization and showed high similarity with the Japanese SMVRE20 GI differing only in one hypothetical protein coding gene which contains transposase DDE domain. In case B, a high similarity exists between E . casseliflavus islands (B2 and B3) while the E . faecium island Tn 6712 of B1 is about 7.2 kb larger. The Dutch E8429 and E9354 showed the highest identity with case B GIs. vanD gene cluster and the integrase gene are marked in green and turquoise, respectively.
| Verfasser: | |
|---|---|
| Dokumenttyp: | Image |
| Erscheinungsdatum: | 2021 |
| Schlagwörter: | Biochemistry / Medicine / Microbiology / Cell Biology / Genetics / Ecology / Infectious Diseases / Virology / Environmental Sciences not elsewhere classified / Biological Sciences not elsewhere classified / MIC / faecium strains / vanD gene clusters / casseliflavus strains / GI / case B / B 1. Transfer / PCR / case B strains / WGS / level vancomycin resistance / VanD-type VRE strains / vancomycin resistance gene clusters / Novel genomic islands / Norway Background Vancomycin-resist. / novel vanD / VanD-type Enterococcus faecium / Clostridiales order origin / antimicrobial susceptibility testing |
| Sprache: | unknown |
| Permalink: | https://search.fid-benelux.de/Record/base-29019105 |
| Datenquelle: | BASE; Originalkatalog |
| Powered By: | BASE |
| Link(s) : | https://doi.org/10.1371/journal.pone.0255187.g003 |
