Data_Sheet_1_Personal characteristics and transmission dynamics associated with SARS-CoV-2 semi-quantitative PCR test results: an observational study from Belgium, 2021–2022.docx

Introduction Following harmonization efforts by the Belgian National Reference Center for SARS-CoV-2, semi-quantitative PCR test (SQ-PCR) results, used as a proxy for viral load, were routinely collected after performing RT-qPCR tests. Methods We investigated both the personal characteristics associated with SQ-PCR results and the transmission dynamics involving these results. We used person-level laboratory test data and contact tracing data collected in Belgium from March 2021 to February 2022. Personal characteristics (age, sex, vaccination, and laboratory-confirmed prior infection) and dis... Mehr ...

Verfasser: Toon Braeye
Kristiaan Proesmans
Dieter Van Cauteren
Ruben Brondeel
Niel Hens
Elias Vermeiren
Naïma Hammami
Angel Rosas
Adrae Taame
Emmanuel André
Lize Cuypers
Dokumenttyp: Dataset
Erscheinungsdatum: 2024
Schlagwörter: Mental Health Nursing / Midwifery / Nursing not elsewhere classified / Aboriginal and Torres Strait Islander Health / Aged Health Care / Care for Disabled / Community Child Health / Environmental and Occupational Health and Safety / Epidemiology / Family Care / Health and Community Services / Health Care Administration / Health Counselling / Health Information Systems (incl. Surveillance) / Health Promotion / Preventive Medicine / Primary Health Care / Public Health and Health Services not elsewhere classified / Nanotoxicology / Health and Safety / Medicine / Nursing and Health Curriculum and Pedagogy / SARS-CoV-2 / viral load / transmission / vaccine effectiveness / contact tracing
Sprache: unknown
Permalink: https://search.fid-benelux.de/Record/base-28946455
Datenquelle: BASE; Originalkatalog
Powered By: BASE
Link(s) : https://doi.org/10.3389/fpubh.2024.1429021.s001

Introduction Following harmonization efforts by the Belgian National Reference Center for SARS-CoV-2, semi-quantitative PCR test (SQ-PCR) results, used as a proxy for viral load, were routinely collected after performing RT-qPCR tests. Methods We investigated both the personal characteristics associated with SQ-PCR results and the transmission dynamics involving these results. We used person-level laboratory test data and contact tracing data collected in Belgium from March 2021 to February 2022. Personal characteristics (age, sex, vaccination, and laboratory-confirmed prior infection) and disease stage by date of symptom onset were analyzed in relation to SQ-PCR results using logistic regression. Vaccine effectiveness (VE) against a high viral load (≥10 7 copies/mL) was estimated from the adjusted probabilities. Contact tracing involves the mandatory testing of high-risk exposure contacts (HREC) after contact with an index case. Odds ratios for test positivity and high viral load in HREC were calculated based on the SQ-PCR result of the index case using logistic regression models adjusted for age, sex, immunity status (vaccination, laboratory-confirmed prior infection), variant (Alpha, Delta, Omicron), calendar time, and contact tracing covariates. Results We included 909,157 SQ-PCR results of COVID-19 cases, 379,640 PCR results from index cases, and 72,052 SQ-PCR results of HREC. High viral load was observed more frequently among recent cases, symptomatic cases, cases over 25 years of age, and those not recently vaccinated (>90 days). The vaccine effectiveness (VE) of the primary schedule in the first 30 days after vaccination was estimated at 47.3% (95%CI 40.8–53.2) during the Delta variant period. A high viral load in index cases was associated with an increased test positivity in HREC (OR 2.7, 95%CI 2.62–2.79) and, among those testing positive, an increased likelihood of a high viral load (OR 2.84, 95%CI 2.53–3.19).