MOESM3 of Age-based partitioning of individual genomic inbreeding levels in Belgian Blue cattle ...

Additional file 3. Figure S2. Comparison of genomic inbreeding coefficients estimated with different marker densities (LD panel in black, 50 K panel in red, BovineHD panel in green and WGS panel in blue) and for different base populations. Genomic inbreeding coefficients were estimated with the Mix14R model (13 HBD-classes model with pre-defined R k rates) for 634 Belgian Blue sires. Different base populations were obtained by selecting different thresholds T that determine which HBD-classes were considered in the estimation of F G-T (e.g., setting the base population approximately 0.5 * T gen... Mehr ...