Significant sQTLs and splicing TWAS reference panels (AMP-AD brain and EADB Belgian LCL cohorts) ...

This dataset is part of the manuscript " New insights into the genetic etiology of Alzheimer’s disease and related dementias " by Bellenguez, Küçükali, et al. Nature Genetics 2022. Publication link: https://www.nature.com/articles/s41588-022-01024-z GitHub repository of all QTL/TWAS data shared for this study: https://github.com/SleegersLab-VIBCMN/EADB_GWAS_NatureGenetics_QTL_TWAS For details, please see the publication. For any questions, please contact Fahri Küçükali (fahri.kucukali@uantwerpen.vib.be) and Kristel Sleegers (Kristel.Sleegers@uantwerpen.vib.be). Significant sQTL catalogues are... Mehr ...

Verfasser: Küçükali, Fahri
Sleegers, Kristel
Dokumenttyp: dataset
Erscheinungsdatum: 2021
Verlag/Hrsg.: Zenodo
Schlagwörter: sQTL / TWAS / EADB / GWAS / Alzheimer's disease / QTL / AMP-AD
Sprache: unknown
Permalink: https://search.fid-benelux.de/Record/base-28884712
Datenquelle: BASE; Originalkatalog
Powered By: BASE
Link(s) : https://dx.doi.org/10.5281/zenodo.5745928

This dataset is part of the manuscript " New insights into the genetic etiology of Alzheimer’s disease and related dementias " by Bellenguez, Küçükali, et al. Nature Genetics 2022. Publication link: https://www.nature.com/articles/s41588-022-01024-z GitHub repository of all QTL/TWAS data shared for this study: https://github.com/SleegersLab-VIBCMN/EADB_GWAS_NatureGenetics_QTL_TWAS For details, please see the publication. For any questions, please contact Fahri Küçükali (fahri.kucukali@uantwerpen.vib.be) and Kristel Sleegers (Kristel.Sleegers@uantwerpen.vib.be). Significant sQTL catalogues are compressed with gzip and tar achieve of splicing TWAS reference panels are compressed with bzip2 . sQTL catalogues The files show significant sQTL - splice junction pairs mapped in AMP-AD brain and EADB Belgian LCL cohorts. The catalogues are in hg38/GRCh38 human genome build. Most of the columns in the files are based on FastQTL output (http://fastqtl.sourceforge.net/). sQTL file columns: variant_id - ID of the ...