Phylogenomic investigation of increasing fluoroquinolone resistance among Belgian cases of Shigellosis between 2013 and 2018 indicates both travel-related imports and domestic circulation
SUPPLEMENTARY MATERIAL : FIGURE S1: Occurrence of gyrA p83, gyrA p87 and parC p80 mutations associated with ciprofloxacin resistance in the background collection. FIGURE S2: Network representation of minimum spanning trees for S. sonnei (A) and S. flexneri (B), TABLE S1: Accession number and metadata for the Belgian samples, TABLE S2: Read trimming statistics, TABLE S3: Assembly and coverage statistics, TABLE S4: Percentage of cgMLST alleles identified, TABLE S5: In silico determined serotypes for all S. flexneri samples, TABLE S6: Detected AMR genes for all samples, TABLE S7: Detected AMR poi... Mehr ...
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Dokumenttyp: | Artikel |
Erscheinungsdatum: | 2021 |
Verlag/Hrsg.: |
MDPI
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Schlagwörter: | Shigella / Fluoroquinolones / Ciprofloxacin / Public health / National reference center / Antimicrobial resistance / Whole genome sequencing (WGS) |
Sprache: | Englisch |
Permalink: | https://search.fid-benelux.de/Record/base-28880908 |
Datenquelle: | BASE; Originalkatalog |
Powered By: | BASE |
Link(s) : | https://doi.org/10.3390/microorganisms9040767 |