Genome of the Netherlands population-specific imputations identify an ABCA6 variant associated with cholesterol levels

Variants associated with blood lipid levels may be population-specific. To identify low-frequency variants associated with this phenotype, population-specific reference panels may be used. Here we impute nine large Dutch biobanks (∼35,000 samples) with the population-specific reference panel created by the Genome of the Netherlands Project and perform association testing with blood lipid levels. We report the discovery of five novel associations at four loci (P value <6.61 × 10

Verfasser: van Leeuwen, E.M.
Karssen, L.C.
Deelen, J.
Isaacs, A.
Medina-Gomez, C.
Mbarek, H.
Kanterakis, A.
Trompet, S.
Postmus, I.
Verweij, N.
van Enckevort, D.
Huffman, J.E.
White, C.C.
Feitosa, M.F.
Bartz, T.M.
Manichaikul, A.
Joshi, P.K.
Peloso, G.M.
Deelen, P.
Dijk, F.
Willemsen, G.
de Geus, E.J.C.
Milaneschi, Y.
Penninx, B.W.J.H.
Francioli, L.C.
Menelaou, A.
Pulit, S.L.
Rivadeneira, F.
Hofman, A.
Oostra, B.A.
Franco, O.H.
Mateo Leach, I.
Beekman, M.
de Craen, A.J.
Uh, H.W.
Trochet, H.
Hocking, L.J.
Porteous, D.J.
Sattar, N.
Packard, C.J.
Buckley, B.M.
Brody, J.A.
Bis, J.C.
Rotter, J.I.
Mychaleckyj, J.C.
Campbell, H.
Duan, Q.
Lange, L.A.
Wilson, J.F.
Hayward, C.
Polasek, O.
Vitart, V.
Rudan, I.
Wright, A.F.
Rich, S.S.
Psaty, B.M.
Borecki, I.B.
Kearney, P.M.
Stott, D.J.
Cupples, L.A.
Jukema, J.W.
van der Harst, P.
Sijbrands, E.J.
Hottenga, J.J.
Uitterlinden, A.G.
Swertz, M.A.
van Ommen, G.J.B
Bakker, P.I.W.
Slagboom, P.E.
Boomsma, D.I.
Wijmenga, C.
van Duijn, C.M.
Dokumenttyp: Artikel
Erscheinungsdatum: 2015
Reihe/Periodikum: van Leeuwen , E M , Karssen , L C , Deelen , J , Isaacs , A , Medina-Gomez , C , Mbarek , H , Kanterakis , A , Trompet , S , Postmus , I , Verweij , N , van Enckevort , D , Huffman , J E , White , C C , Feitosa , M F , Bartz , T M , Manichaikul , A , Joshi , P K , Peloso , G M , Deelen , P , Dijk , F , Willemsen , G , de Geus , E J C , Milaneschi , Y , Penninx , B W J H , Francioli , L C , Menelaou , A , Pulit , S L , Rivadeneira , F , Hofman , A , Oostra , B A , Franco , O H , Mateo Leach , I , Beekman , M , de Craen , A J , Uh , H W , Trochet , H , Hocking , L J , Porteous , D J , Sattar , N , Packard , C J , Buckley , B M , Brody , J A , Bis , J C , Rotter , J I , Mychaleckyj , J C , Campbell , H , Duan , Q , Lange , L A , Wilson , J F , Hayward , C , Polasek , O , Vitart , V , Rudan , I , Wright , A F , Rich , S S , Psaty , B M , Borecki , I B , Kearney , P M , Stott , D J , Cupples , L A , Jukema , J W , van der Harst , P , Sijbrands , E J , Hottenga , J J , Uitterlinden , A G , Swertz , M A , van Ommen , G J B , Bakker , P I W , Slagboom , P E , Boomsma , D I , Wijmenga , C & van Duijn , C M 2015 , ' Genome of the Netherlands population-specific imputations identify an ABCA6 variant associated with cholesterol levels ' , Nature Communications , vol. 6 , 6065 , pp. 6065 . https://doi.org/10.1038/ncomms7065
Schlagwörter: /dk/atira/pure/keywords/cohort_studies/netherlands_twin_register_ntr_ / name=Netherlands Twin Register (NTR) / /dk/atira/pure/sustainabledevelopmentgoals/good_health_and_well_being / name=SDG 3 - Good Health and Well-being
Sprache: Englisch
Permalink: https://search.fid-benelux.de/Record/base-26843392
Datenquelle: BASE; Originalkatalog
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Link(s) : https://research.vu.nl/en/publications/228a7a1a-c9a9-4d32-b462-ad04b4d04c48