Estimation of Genetic Relationships Between Individuals Across Cohorts and Platforms:Application to Childhood Height

Combining genotype data across cohorts increases power to estimate the heritability due to common single nucleotide polymorphisms (SNPs), based on analyzing a Genetic Relationship Matrix (GRM). However, the combination of SNP data across multiple cohorts may lead to stratification, when for example, different genotyping platforms are used. In the current study, we address issues of combining SNP data from different cohorts, the Netherlands Twin Register (NTR) and the Generation R (GENR) study. Both cohorts include children of Northern European Dutch background (N = 3102 + 2826, respectively) w... Mehr ...

Verfasser: Fedko, Iryna O.
Hottenga, Jouke-Jan
Medina-Gomez, Carolina
Pappa, Irene
van Beijsterveldt, Catharina E. M.
Ehli, Erik A.
Davies, Gareth E.
Rivadeneira, Fernando
Tiemeier, Henning
Swertz, Morris A.
Middeldorp, Christel M.
Bartels, Meike
Boomsma, Dorret I.
Dokumenttyp: Artikel
Erscheinungsdatum: 2015
Reihe/Periodikum: Fedko , I O , Hottenga , J-J , Medina-Gomez , C , Pappa , I , van Beijsterveldt , C E M , Ehli , E A , Davies , G E , Rivadeneira , F , Tiemeier , H , Swertz , M A , Middeldorp , C M , Bartels , M & Boomsma , D I 2015 , ' Estimation of Genetic Relationships Between Individuals Across Cohorts and Platforms : Application to Childhood Height ' , Behavior Genetics , vol. 45 , no. 5 , pp. 514-528 . https://doi.org/10.1007/s10519-015-9725-7
Schlagwörter: Genotyping platform / Heterogeneity / Imputation / GCTA / SNP-heritability / Height / GENOME-WIDE ASSOCIATION / NETHERLANDS TWIN REGISTER / COMMON SNPS EXPLAIN / POPULATION-STRUCTURE / ADMIXED POPULATIONS / LARGE PROPORTION / GENERATION R / HERITABILITY / ARCHITECTURE
Sprache: Englisch
Permalink: https://search.fid-benelux.de/Record/base-26825650
Datenquelle: BASE; Originalkatalog
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Link(s) : https://hdl.handle.net/11370/7ca6982e-db78-425c-96ea-874a9f8146d6