Overview of an outbreak with five sampled hosts and two introductions.

The index cases of the sampled hosts (blue squares) are connected via the history host (red square). Coalescence of lineages happens at a different rate in the history host than in the sampled hosts. The black lines give the phylogenetic tree of the outbreak and the red arrows indicate transmissions between hosts.

Volltext
Verfasser: Bastiaan R. Van der Roest
Martin C. J. Bootsma
Egil A. J. Fischer
Don Klinkenberg
Mirjam E. E. Kretzschmar
Dokumenttyp: Image
Erscheinungsdatum: 2023
Schlagwörter: Medicine / Biotechnology / Evolutionary Biology / Ecology / Cancer / Infectious Diseases / Computational Biology / Biological Sciences not elsewhere classified / Mathematical Sciences not elsewhere classified / Information Systems not elsewhere classified / determine risk factors / aid infection control / multiple phylogenetic clusters / method correctly identifies / bayesian inference method / infectious disease outbreaks / div >< p / dutch mink farms / introduced multiple times / estimate transmission trees / genome sequencing data / infectious disease / genome sequencing / mink farms / transmission trees / multiple introductions / 63 farms / 13 farms / transmission routes / transmission events / single introduction / priori split / phybreak </ / observed cases / new feature / host dynamics / existing models / epidemiological data / complex class / always true / additional feature / accuracy depending
Sprache: unknown
Permalink: https://search.fid-benelux.de/Record/base-26676521
Datenquelle: BASE; Originalkatalog
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Link(s) : https://doi.org/10.1371/journal.pcbi.1010928.g001